African Journal of
Biotechnology

  • Abbreviation: Afr. J. Biotechnol.
  • Language: English
  • ISSN: 1684-5315
  • DOI: 10.5897/AJB
  • Start Year: 2002
  • Published Articles: 12501

Full Length Research Paper

Structure of mitochondrial DNA control region of Argyrosomus amoyensis and molecular phylogenetic relationship among six species of Sciaenidae

  Chao Chen1,2*, Yan Lu Li1,2, Lu Wang1 and Guang Ye Gong1  
  1Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao, 266071, China. 2College of Fisheries and Science, Shanghai Ocean University, Shanghai, 201306, China.  
Email: [email protected]

  •  Accepted: 17 February 2012
  •  Published: 29 March 2012

Abstract

 

The structure of the mitochondrial DNA (mtDNA) control region of Argyrosomus amoyensis was examined in this study. TAS, cTAS, CSB-D to CSB-F and CSB-1 to CSB-3 segments were detected in the species. The results indicated that the structures of these parts were different from that of most fishes. All the mtDNA control region sequences examined had missing tandem repeat sequences downstream of CSB-3, which were the same as most fishes’. In addition, part of the COI gene was used to analyze the phylogenetic relationships of six Sciaenids species. The phylogenetic tree results supported the classification by traditional morphology, and COI barcodes were useful for identifying these six species of Sciaenids.

 

Key words: Control region, structure, Argyrosomus amoyensis, COI, phylogenetic relationship, Sciaenidae.