African Journal of
Biotechnology

  • Abbreviation: Afr. J. Biotechnol.
  • Language: English
  • ISSN: 1684-5315
  • DOI: 10.5897/AJB
  • Start Year: 2002
  • Published Articles: 12504

Full Length Research Paper

Genetic molecular diversity in interspecific peanut lines differing in temporal resistance to peanut bud necrosis disease

Jignesh H. Kamdar
  • Jignesh H. Kamdar
  • Directorate of Groundnut Research (ICAR), Junagadh 362001, Gujarat, India.
  • Google Scholar
Bindu R. Goswami
  • Bindu R. Goswami
  • Directorate of Groundnut Research (ICAR), Junagadh 362001, Gujarat, India.
  • Google Scholar
Sandip Kumar Bera
  • Sandip Kumar Bera
  • Directorate of Groundnut Research (ICAR), Junagadh 362001, Gujarat, India.
  • Google Scholar


  •  Accepted: 12 December 2013
  •  Published: 15 January 2014

Abstract

Peanut bud necrosis disease is one of the major diseases in peanut. Interspecific pre-breeding lines were identified as resistant to bud necrosis disease. Molecular diversity analysis in 115 lines resistant to bud necrosis disease using simple sequence repeat markers revealed wide genetic diversity among lines. Out of 219 bands amplified, 205 were found polymorphic. Polymorphism information content (PIC) value ranged from 0.5 to 0.94, with an average of 0.82. The cluster analysis and PCoA grouped 115 resistant lines and one susceptible cultivar into three major clusters sharing 58% similarity. Susceptible cultivar KRG-1 was distantly related to resistant lines NRCGCS-28 and NRCGCS-86. AMOVA predicted 96% variation within population and 4% among populations. NRCGCS-28 and NRCGCS-86 were found to be moderately resistant and KRG-1 as highly susceptible under artificially challenged inoculation conditions. The incubation period for appearance of disease symptoms were longer in NRCGCS-28 and NRCGCS-86 than KRG-1 under artificially challenged inoculation conditions. Thus, the present study reports additional sources for resistance to peanut bud necrosis disease (PBND).

 

Key Words: Peanut, peanut bud necrosis disease (PBND), simple sequence repeat (SSR), genetic diversity.

Abbreviation

Abbreviations: PBND, Peanut bud necrosis disease; PBNV, peanut bud necrosis virus; RAPD, random amplification of polymorphic DNA; ISSR, inter-simple sequence repeat; AFLP, amplified fragment length polymorphism; SSR, simple sequence repeat; CTAB, cetyle trimethyl ammonium bromide; PCR, polymerase chain reaction;  PIC, polymorphism information content; MI, marker Index; PCoA, principal coordinate analysis; AMOVA, analysis of molecular variance.