African Journal of
Biotechnology

  • Abbreviation: Afr. J. Biotechnol.
  • Language: English
  • ISSN: 1684-5315
  • DOI: 10.5897/AJB
  • Start Year: 2002
  • Published Articles: 12498

Table of Content: 3 June 2009; 8(11)

June 2009

Sustainable development and bioeconomic prosperity in Africa: Bio-fuels and the South African gateway

African countries along with the co-founders of the New Partnership for Africa’s Development (NEPAD) must use biotechnology as a valuable tool for socio-economic and sustainable development. National, regional and international consultations and debates ensure timely attention of peer-reviewed guidelines concerning significant issues like bio-risks, bio-safety, and bio-security that impinge on daily human...

Author(s): Dorsamy (Gansen) Pillay, and Edgar J. Da Silva,γ

June 2009

Transcription factor profiling unveils the oncogenes involved in the pathogenesis of cutaneous T cell lymphomas

The finding in colon carcinoma that cancerogenesis is a sequence of activation of different oncogenes and inactivation of tumor suppressor genes has increased the efforts to identify the genes that are responsible for the progression of different kinds of cancer. Many activated oncogenes and inactivated tumor suppressor genes have been detected in cancer cells during the last decades, but for most cancers no network or...

Author(s): Udo Döbbeling

March 2009

The most stirring technology in future: Cellulase enzyme and biomass utilization

  In recent years, fundamental and applied researches on cellulase enzyme have not only generated significant scientific knowledge but also have revealed their enormous potential in biotechnology. Growing attention has been devoted to its bioconversion of biomass into fuel ethanol, considered the cleanest liquid fuel alternative to fossil fuels. Significant advances have been made towards the production and...

Author(s): Xing-hua Li, Hua-jun Yang, Bhaskar Roy, Dan Wang, Wan-fu Yue, Li-jun Jiang, Enoch Y. Park and Yun-gen Miao.

March 2009

Phylogeny of Artemisia L.: Recent developments

  In this review, classification and phylogeny of genus Artemisia L. is discussed. Its centers of diversity lie in the temperate and cold temperate regions of the Eurasia, North America and Asia. Artemisia has two basic chromosome numbers, with ploidy levels x=9 and x=8. Chromosome number in diploid is most often 2n=18 or 16. The genus is divided into five large...

Author(s): Muhammad Qasim Hayat, Muhammad Ashraf, Mir Ajab Khan, Tariq Mahmood, Mushtaq Ahmad and Shazia Jabeen

June 2009

Biotechnological potentials of Seidlitzia rosmarinus: A mini review

Seidlitzia rosmarinus is a perennial woody plant grown mostly along the banks of salt marshes and in soils with high saline water tables. This plant being a halophyte is very well adapted to grow in dry and salt affected desert soils. It plays an important role in both soil preservation and maintenance. The leaves, stems and seeds harvested in fall are used as fodder for livestock. Ashes remaining after burning the...

Author(s): M. R. Hadi

June 2009

A new electrophoresis technique to separate microsatellite alleles*

Analysis of large numbers of SSR (simple sequence repeats: microsatellites) reactions can be tedious, time-consuming and expensive. The objective of this study was to report a new electrophoresis method to analyze and visualize SSR data quickly and accurately and compare it to the ability of four other electrophoresis methods.  Individual PCR reactions consisting of DNA from severalCornus florida L. (flowering...

Author(s): Xinwang Wang, Timothy A. Rinehart, Phillip A. Wadl, James M. Spiers,Denita Hadziabdic, Mark T. Windham and Robert N. Trigiano

June 2009

Comparison of genetic detection efficiency of different markers under the same genetic background

Chinese native sheep populations, Hu sheep, Tong sheep, Small-tailed Han sheep and Tan sheep were used to study the efficiency of genetic markers. The genetic markers used in this study include morphological and ecological indices, blood protein enzyme, microsatellite DNA and the combination of three markers. The results showed that the morphological and ecological indices are not accurate tools to determine the...

Author(s): Wei Sun, Hassan Hussein Musa, Hong Chang and Kenji Tsunoda

June 2009

Differential expressions of putative genes in various floral organs of the Pigeon orchid (Dendrobium crumenatum) using GeneFishing

Nine Differentially Expressed Genes (DEGs) were detected in the five floral organs of Dendrobium crumenatum and three DEGs of relatively high expression in the column, were significantly homologous to the small Heat Shock Protein (HSP) differentially regulated during pollen development and heat stress in tobacco (DEG3-8), pectin methylesterase enzyme (PME) which was a male-flower specific gene in Salix...

Author(s): Faridah, Q. Z. , , Ng, B. Z., Raha, A. R. , Umi, K. A. B.  and Khosravi, A. R.

June 2009

Sequence analysis and over-expression of ribosomal protein S28 gene (RPS28) from the Giant Panda

RPS28 is a component of the 40S small ribosomal subunit encoded by RPS28gene, which is specific to eukaryotes. The cDNA and the genomic sequence ofRPS28 were cloned successfully from the Giant Panda using RT-PCR technology and Touchdown-PCR, respectively. Both sequences were analyzed preliminarily and the cDNA of the RPS28 gene was also overexpressed...

Author(s): Wan-ru Hou, Yi-ling Hou, Yan-zhe Hao, Yu-jie Du, Tian-Zhang and Zheng-song Peng

April 2009

Performance of climber common bean (Phaseolus vulgaris L.) lines under Researcher Designed Farmer Managed (RDFM) system in three bean agro-ecological zones of Malawi

An on-farm study was carried out in 2003-2004 and 2004-2005 growing seasons under rain-fed condition in five sites namely Thondwe and Matapwata in Zomba and Thyolo districts respectively, Chipuka in Ntchisi district, Ntchenachena and Ngong’a in Rumphi district representing three bean agro-ecological zones of Malawi. Seven climber common bean entries; CAB 19, RWV 1046, BCMV B4, AND 659, RWV 1042-2-3, 5P/5 and DC...

Author(s): V. M. Mwale, J. M.  Bokosi, C. M. Masangano, M. B. Kwapata, V. H. Kabambe, and C. Miles

June 2009

Effect of auto exhaust emission on the phenology of Cassia siamea and Peltophorum pterocarpum growing in different areas of Karachi

The response of plant species to different seasons and environmental pollutants is of important interest to researchers. Observations were made on Cassia siameaand Peltophorum pterocarpum plants growing in the polluted and other less polluted areas of Karachi. The phenology of C. siamea and P. pterocarpum was significantly (p<0.05) affected in the polluted environment of Karachi....

Author(s): Muhammad Shafiq, M. Zafar Iqbal, Mohammad Athar and Manzar Qayyum

June 2009

The use of cross species SSR primers to study genetic diversity of okra from Burkina Faso

Sixteen pairs of primers designed to amplify SSR regions of Medicago truncatulawere used to amplify genomic DNA samples of 20 different okra accessions collected from different regions Burkina Faso.  These primers amplified a number of fragments that range from 1-16 with the sizes of 396-506 bp.  Each accession was scored for the presence or absence of the bands and phylogenetic analysis of these data...

Author(s): Mahamadou Sawadogo, Jeremy T. Ouedraogo, Didier Balma, Mahama Ouedraogo, Bhavani S. Gowda, Christopher Botanga and Michael P. Timko

June 2009

Predicting the above-ground biomass of calabrian pine (Pinus brutia Ten.) stands in Turkey

Biomass equations are presented for calabrian pine stands within the Adana-Karaisalı Regional Forestry Management Area. Thirty three sample plots, each of 0.04 ha, were chosen in order to define the biomass equations of calabrian pine, the most common needle leave species in Turkey. A tree which is the most similar to mean tree according to basal area was cut in each sample area as a sample tree. Various models were...

Author(s): Ali Durkaya, Birsen Durkaya and Alpaslan Ünsal

June 2009

Germination, growth and nodulation of Trigonella foenum graecum (Fenu Greek) under salt stress

  In this work, we analyzed the effects of salinity on seed germination, growth and nodulation of fenugreek plants. The germination of fenugreek seeds was not affected by salt concentrations lower than 140 mM. Two saline tolerant indigenous rhizobia strains were isolated from the root nodules of fenugreek grown in two different soils.  The two rhizobial strains were tested for their ability to grow under...

Author(s): Hanaa Abdelmoumen and Mustapha Missbah El Idrissi

June 2009

A new time-saving transformation system for Brassica napus

By optimizing different parameters for infection, an efficient Agrobacterium-mediated transformation system for Brassica napus was developed. A series of combinations of optical densities, infection durations, concentrations of acetosyringone and silwet L77 were evaluated. Maximum transformation efficiency reached 18.93% when cotyledonary nodes were infected for 10 min with...

Author(s): Fanming Kong, Juan Li, Xiaoli Tan, Lili Zhang, Zhiyan Zhang, Cunkou Qiand Xiaoke Ma

June 2009

Biological control of Rhizoctonia solani on potato by Verticillium biguttatum

  Ten isolates of Verticillium biguttatum were obtained from sclerotia of Rhizoctonia solani on potato tubers in Erzurum, Turkey. The interaction between V. biguttatumand R. solani was studied in vitro and in vivo. V. biguttatum isolates affected R. solani by antibiosis and parasitism. All isolates of V. biguttatum inhibited the...

Author(s): Erkol Demirci, Cafer Eken and Elif Dane

June 2009

An AFLP marker linked to turnip mosaic virus resistance gene in pak-choi

  Pak-choi is one of the most important vegetable crops in China. Turnip mosaic virus (TuMV) is one of its main pathogen. Screening the molecular marker linked to the TuMV resistance gene is an efficient method to improve pak-choi breeding. In this paper, a dominant gene, TuRBCH01, has been mapped. 180 F2 individuals were inoculated with TuMV-C5 and tested by direct...

Author(s): Wang Xinhua, Chen Huoying, Zhu Yuying and Hou Ruixian

June 2009

Influence of phytohormones and medium on the shoot regeneration from leaf of Swertia chirata Buch.-Ham. Ex wall. in vitro

A procedure for in vitro shoot regeneration was formed from leaves derived from the field grown Swertia chirata and the effects of phytohormones and medium on the regeneration of shoot were tested by an orthogonal experiments. The best result was obtained in the 190-2 medium with 13.32 mM 6-benzylaminopurine and 0.54 mM α-naphthaleneacetic acid. The result of orthogonal analysis of...

Author(s): Li Wang,, Lizhe An, Yanping Hu, Lixin Wei and Yi Li

June 2009

Combining ability for maize grain yield and other agronomic characters in a typical southern guinea savanna ecology of Nigeria

Field experiments were conducted at the University of Ilorin Teaching and Research Farm in 2005 and 2006 cropping seasons with the objective to evaluate the combining ability for maize grain yield and other agronomic characters in 10 open pollinated maize varieties, which have been selected for high yield and stress tolerance. General combining ability (gca) and year (y) effects were significant for all the parameters...

Author(s): Bello, O. B. and Olaoye, G.

June 2009

Plant regeneration of Brassica oleracea sub sp. italica (Broccoli) CV Green Marvel as affected by plant growth regulators

Hypocotyls and shoot tips were used as explants in in vitro plant regeneration of broccoli (Brassica oleracea subsp. italica) cv. Green Marvel. The explants were excised from sterile germinated seedlings and placed on shoot induction medium containing basal salts of Murashige and Skoog (MS) and various concentrations of 6-benzylaminopurine (BAP) and α-naphthaleneacetic acid (NAA). The highest...

Author(s): Ravanfar, S. A., Aziz, M. A., Kadir, M. A., Rashid, A. A. and Sirchi, M. H. T.

June 2009

Effect of plant growth regulators on callus induction and plant regeneration in tuber segment culture of potato (Solanum tuberosum L.) cultivar Diamant

The present study was conducted to investigate the effects of different concentrations and combinations of growth regulators on callus induction and plant regeneration of potato (Solanum tuberosum L.) cultivar Diamant. The tuber segments were used as explants and cultured on Murashige and Skoog (MS)medium supplemented with different concentrations of α-naphthalene acetic acid...

Author(s): Khadiga G. Abd Elaleem, Rasheid S. Modawi and Mutasim M. Khalafalla

June 2009

Bacterial diversity in a tropical crude oil-polluted soil undergoing bioremediation

The bacterial diversity in a tropical soil experimentally polluted with crude oil during a 57 days bioremediation was investigated in five 1 m2 plots using total culturable hydrocarbon utilizing bacteria, heterotrophic bacteria and gas chromatographic analyses. Four out of the five experimental plots received each 4 L of Bonny light crude oil while three treatment plots received 3 kg of NPK, urea fertilizers or...

Author(s): C. B. Chikere, G. C. Okpokwasili and B. O. Chikere

June 2009

Characterization of hydrocarbon utilizing bacteria in tropical marine sediments

Hydrocarbon utilizing bacteria present in Nembe waterside sediments, a marine habitat in Port Harcourt, Nigeria, were characterized using standard culture dependent techniques. The sediment samples were collected along the navigational route with an Eckman sediment grab (Wild Life Supply Co., NY). The samples had meant total heterotrophic bacterial count of 6.6 × 107cfu g-1 and hydrocarbon utilizing bacteria...

Author(s): C. B. Chikere, G. C. Okpokwasili and O. Ichiakor

June 2009

Cloning and sequence analysis of benzo-a-pyrene-inducible cytochrome P450 1A in Nile tilapia (Oreochromis niloticus)

Polycyclic aromatic hydrocarbons (PAHs), dioxins, dibenzofurans and polychlorinated biphenyls (PCBs) present in polluted environment induce cytochrome P4501A (CYP1A) isozyme in fish which in turn results in a marked increased production of carcinogenic metabolites. The induction of hepatic CYP1A in fish by certain classes of chemicals has been suggested as an early warning system, a “most sensitive biological...

Author(s): Abeer A. I. Hassanin, Yoshino Kaminishi, Mohamed M. M. Osman, Zamzam H. Abdel-Wahad, Mohamed A. H. El-Kady, and Takao Itakura

June 2009

Culture conditions for the production of a tannase of Aspergillus tamarii IMI388810 (B)

Aspergillus tamarii IMI388810 (B) a tannic acid degrading fungus was isolated from soil inundated by effluent of a tannery at Oji River local Government Area of Enugu State, Nigeria. It was identified by CABI Bioscience, United Kingdom as A. tamariiwith accession number of IMI 388810 (B). This fungus produced tannase in a fermentation medium M containing tannic acid as the only carbon source. Time course of...

Author(s): Enemuor, S. C. and Odibo, F. J. C.

June 2009

Biodegradation of 2,4-dichlorophenol originating from pharmaceutical industries

  The aims of this work were to isolate a microorganism from the wastewater of pharmaceutical industries, to examine the difference in its growth utilization of 2,4-dichlorophenol as the sole carbon source pre and post-exposure to UV-irradiation and to investigate its efficiency of biodegradation at different temperatures and pH values using a laboratory benchtop bioreactor. Sludge was...

Author(s): Ali Z. Elkarmi, Khaled H. Abu-Elteen, Atta A. Atta and Nisreen A. Abu-Sbitan

June 2009

Technological and chemical properties of heat-treated Anatolian black pine wood

In this study the effect of heat treatment on air-dry density (Dm), oven-dry density (D0), shrinkage (β), swelling (α), fiber saturation point (FSP), compression strength parallel to grain (σc//), bending strength (σb), modulus of elasticity (MOE) in bending, Brinell-hardness (HB), equilibrium moisture content (EMC), chemical content and cellulose crystallinity of Anatolian black...

Author(s): M. Hakan Akyildiz, Saim Ates and Hasan Özdemir

June 2009

Trochiscia (Chlorococcales) a new taxon from Central Anatolian Region, Turkey

A new species, Trochiscia anatolicum, is described from a fresh water habitat, Dam Lake in the middle Anatolian region. This new taxon was first found on examination of algal samples from Kesikkopru Dam Lake. Light microscopes indicate a clear relationship with species in the genus Trochiscia. Some of the characteristic features of the new taxon include a spines and irregular cell wall. And this...

Author(s): Tahir Atici

June 2009

Phenotypic and genotypic characterization of lactic acid bacteria isolated from Azerbaijani traditional dairy products

Studied lactic acid bacteria (LAB) were isolated from two types of final ready-to-eat artisanal dairy products (cheeses – Agdas, Sheki and yogurts - Karabakh, Ganja and Baku) manufactured in Azerbaijan. The Agdas cheese belongs to the group of semi hard cheeses whilst the Sheki cheese belongs to hard cheeses. Both of cheeses were produced from cow’s milk without the addition of the starter cultures. The...

Author(s): Amarela Terzic-Vidojevic, Maja Tolinacki, Milica Nikolic, Jelena Lozo, Jelena Begovic, Sahib Gurban oglu Gulahmadov, Akif Alekperovich Kuliev, Michèle Dalgalarrondo, Jean-Marc Chobert, Thomas Haertlé and Ljubisa Topisirovic

June 2009

Antifungal effect of some plant extracts on Alternaria alternata and Fusarium oxysporum

  In vitro studies were carried out to test the antifungal activity of 5 plant extracts;Cinnamomum zeylanicum (Cinnamon), Cymbopogon proximus (Halfa barr),Laurus nobilis (Laurel), Persea americana (Avocado) and  Zingiber officinale(Ginger) performed with either cold distilled water (CDW) or boiling (BDW) on two pathogenic fungi, Alternaria...

Author(s): Fawzi, E. M., Khalil, A. A. and Afifi, A. F.

June 2009

Isolation and purification of alkaline keratinase from Bacillus sp. 50-3

A new alkaline keratinase extracted from Bacillus sp. 50-3 was isolated and purified in this study. Solid ammonium sulfate was selected to precipitate the enzyme. Its proper adding mass was also determined. Through solid ammonium sulfate precipitation and liquid chromatography via the DEAE-Sephadex-A50 column using with azokeratin as a substrate, 17.7-fold purification with a yield of 46.5% was obtained. The...

Author(s): Bin Zhang, Zhong-wei Sun, Dan-Dan Jiang and Tian-Gui Niu

June 2009

Analysis of genetic relationships of mulberry (Morus L.) germplasm using sequence-related amplified polymorphism (SRAP) markers

Sequence-related amplified polymorphism (SRAP) is a novel molecular marker technique designed to amplify open reading frames (ORFs). Here, for the first time, SRAP was used to identify mulberry germplasm. Twenty-three mulberry accessions were screened using SRAP techniques, with 12 primer combinations selected for their reproducibility and polymorphism. Out of 83 PCR fragments scored, 59 (71.1%) were polymorphic, with...

Author(s): Weiguo Zhao, Rongjun Fang, Yile Pan, Yonghua Yang, Jong-Wook Chung, Il-Min Chung, and Yong-Jin Park

April 2009

An effective disinfection protocol for plant regeneration from shoot tip cultures of strawberry

  An effective method of disinfection protocol and micropropagation with an enhanced survival rate of explants and reduced phenol induced browning in strawberry was developed. The survival rate of three genotypes was between 89.2 - 100%. Shoot tip were able to develop into plantlet on a hormone-free MS medium when cultured under dim light (500 lux). Two media, M1 and M2 were chosen to compare the...

Author(s): Chien-Ying Ko, A. M. Al-Abdulkarim, S. M. Al-Jowid, and A. Al-Baiz

June 2009

Determination of ontogenetic selection criteria for grain yield in spring barley (Hordeum vulgare) by path-coefficient analysis

  Path-coefficient analysis was performed to determine the interrelationships among grain yield, yield components (spike number per m-2, kernel number per spike, average kernel weight) and some phenological characteristics (duration and growing degree-days of vegetative and grain-filling periods) in spring barley genotypes in 2004-2005. Grain yield depended mainly on spike number per m-2 and kernel number...

Author(s): Bilal Deniz, Zuhal Kavurmaci and Mehmet Topal

June 2009

Identification of a taxol-producing endophytic fungus EFY-36

  Morphological and molecular methods were used to identify the statues of anisolate, EFY-36, a taxol-producing endophytic fungus. Based on the morphology of the fungal colony, the mechanism of spore production and the characteristics of the spores, the isolate is Mucor spp. Furthermore, the analysis of 18S ribosome RNA sequence of the isolate was achieved using PCR...

Author(s): X. Zhou, W. Zheng, H. Zhu and K. Tang

June 2009

Effect of controlled fermentation on the oligosaccharides content of two common Nigerian Vigna unguiculata beans (drum and oloyin)

Two common local beans (Vigna unguiculata) varieties known as drum and oloyinwere used for this study. These beans were fermented using Lactobacillus plantarum, Lactobacillus fermentum and Pediococcus acidilactici. The fermentation was carried out for 24, 48, and 72 h at ambient temperature. The results showed that there was no significant difference in the temperature values of...

Author(s): Gbenga Adedeji Adewumi, and Sunday Ayodele Odunfa

June 2009

Immobilization of catalase via adsorption into natural and modified active carbon obtained from walnut in various methods

  In the present work, the immobilization of catalase into natural active carbon and active carbon modified by hydrochloric acid was carried out. In the experimental section, the effects of pH, ionic strength and reaction temperature were chosen as parameters, with experiments performed in batch system.  For the optimization of immobilization procedure, values of kinetic parameters were evaluated. It...

Author(s): S. Alkan, A. Gür, M. Ertan, A. Savran, T. Gür and Y. Genel

January 2009

The effect of thyroxine on silk gland and the effect of two thyroxine-treated mulberry species feeding on silk quality in the silkworm Bombyx mori (Lepidoptera: Bombycidae)

The influence of feeding mulberry leaves treated with thyroxine to the growth of the silk gland, and the effect of two different mulberry species, that is, Morus nigra and Morus multicaulis treated with thyroxine on silk quality in the silkworm were studied. The silk glands from thyroxine treated Bombyx morilarvae weighed heavier than control. The weight of the posterior silk gland, where...

Author(s): Intan Ahmad, Sinta Patrakomala, Susi Dwiyanti and Ramadhani Putra

June 2009

The effects of sodium perchlorate on the liver of Molly Fish (Poecilia sphenops, Cyprinidae, Teleostei)

Adult male molly fishes were reared up to ten days in control water or in water containing sodium perchlorate at concentrations of 1, 5, 25 and 125 ppm. Remarkable steatosis, fibrosis, hyperemia and necrosis were distinguished in parallel with increasing sodium perchlorate concentrations. The striking cellular damages were observed especially in 25 and 125 ppm sodium perchlorate exposed animals. The...

Author(s): Kolbaşı Tekkan Burcu, Ä°ÅŸisaÄŸ Üçüncü Sema and Önen Özlem