African Journal of
Microbiology Research

  • Abbreviation: Afr. J. Microbiol. Res.
  • Language: English
  • ISSN: 1996-0808
  • DOI: 10.5897/AJMR
  • Start Year: 2007
  • Published Articles: 5241

Full Length Research Paper

Molecular typing of Vibrio alginolyticus strains isolated from Tunisian marine biotopes by two PCR-based methods (ERIC and REP)

Lajnef Rim1,2, Snoussi Mejdi1*, Balboa Sabela2, Bastardo Asmine2, Laabidi Haifa1, Chatti Abdelwaheb1, Abdennaceur Hassen1 and Romalde Jesús Lopez2
1Laboratory of Waste Water Treatment, Centre for Research and Technology of Water, Technopole of Borj-Cédria, BP 901, Hammam-Lif 2050, Tunisia. 2Department of Microbiology and Parasitology, Faculty of CIBUS-Biology, University of Santiago, Santiago de Compostela, 15782, Santiago de Compostela, Spain.
Email: [email protected]

  •  Accepted: 25 October 2011
  •  Published: 14 June 2012

Abstract

The aim of the present study was to analyze the intraspecific genetic variability within Vibrio alginolyticus isolated strains from different Tunisian aquatic biotopes by using two PCR–based techniques. Seventy eight strains including nine Vibrio reference strains and sixty nine V. alginolyticus isolated strains from seawater, sediment, fish (diseased Gilthead seabream, Sparus aurata and Sea bass, Dicentrachus labrax), and from mollusks (Crassostrea gigasMytilis edulis) were analyzed by repetitive extragenic palindromic PCR (REP-PCR) and enterobacterial repetitive intergenic consensus sequence PCR (ERIC-PCR). In this study, all strains were typable y in both techniques tested and 62 genotypes were generated by ERIC-PCR and 58 genotypes by REP-PCR. In conclusion, these two methods can be used as a rapid and easy protocol to access the genetic relatedness between environmental V. alginolyticus strains.

 

Key words: Vibrio alginolyticus, genetic diversity, repetitive extragenic palindromic PCR (REP-PCR), enterobacterial repetitive intergenic consensus sequence PCR (ERIC-PCR).