Journal of
Medicinal Plants Research

  • Abbreviation: J. Med. Plants Res.
  • Language: English
  • ISSN: 1996-0875
  • DOI: 10.5897/JMPR
  • Start Year: 2007
  • Published Articles: 3835

Full Length Research Paper

Population structure of Euodia rutaecarpa in China revealed by amplified fragment length polymorphism (AFLP) and sequence-related amplified polymorphism (SRAP)

Baoyang Wei 1*, Liang Cao2, Shunxiang Li1,2#, Dan Huang2, Guangxian Cai2 and Lu Xiangyang1   #This author contributed to this paper equally.
1College of Bioscience and Biotechnology, Hunan Agricultural University, Changsha 410128 PR, China. 2Key Laboratory of Modernization of Chinese Medicine, College of Pharmacy, Hunan University of Chinese Medicine, Changsha 410208, PR, China.
Email: [email protected]

  •  Accepted: 11 October 2011
  •  Published: 16 December 2011

Abstract

In the present paper, experimental materials of 33 accessions representative of the Euodia rutaecarpa from four Chinese provinces were analyzed using the sequence-related amplified polymorphism (SRAP) and amplified fragment length polymorphism (AFLP) techniques, focusing on their molecular discrimination and the assessment of their genetic relatedness. For the analysis, we optimized 10 pairs of SRAP primers and 6 pairs of AFLP primers, (The software package NTSYS-pc 2.1 was applied to analyze the data matrix) and cluster analysis distributed samples into two clusters, one with E. rutaecarpa var. officinalis (Dode) Huang and the other with E. rutaecarpa (Juss.) Benth by SRAP+AFLP markers in the same similarity coefficient of 0.53 (Genetic parameters also analyzed using POPGENE version 1.31). Genetic diversity in the species was detected with SRAP (H = 0.2260, I = 0.3341) and AFLP (H = 0.1665; I = 0.2518) markers. Genetic variability levels of E. rutaecarpa var.officinalis (Dode) Huang was higher than genetic variability levels of E. rutaecarpa (Juss.) Benth. Our study shown that both SRAP and AFLP molecular markers are in high efficiency in detecting the genetic diversity of E. rutaecarpa.

 

Key words: Euodia rutaecarpa, variety amplified fragment length polymorphism (AFLP) markers, sequence-related amplified polymorphism (SRAP) markers, genetic diversity.