African Journal of
Biotechnology

  • Abbreviation: Afr. J. Biotechnol.
  • Language: English
  • ISSN: 1684-5315
  • DOI: 10.5897/AJB
  • Start Year: 2002
  • Published Articles: 12487

Full Length Research Paper

Analysis of in vivo binding of yeast heat shock factor to promoter DNA

K.H. Liu1,2*, L.M. Zhang2*, X.W. Ding1, B.W. Deng1, and W.Q. Chen1
  1Bio-resources Key Laboratory of Shaanxi, Shaanxi University of Technology, Shaanxi Hanzhong 723001, P. R. China. 2Key Laboratory for Conservation and Utilization of Bio-resources,Yunnan University, Kunming, 650091, P. R. China.
Email: [email protected]; [email protected]

  •  Accepted: 13 February 2008
  •  Published: 17 April 2008

Abstract

 

The in vivo binding of yeast heat shock factor (HSF) to promoter domains of stress-inducible genes was examined using chromatin immunoprecipitation (ChIP) combined with PCR. The promoter-specfic PCR amplification of DNA immunoprecipitated with antibodies against HSF showed that yeast HSF was bound constitutively to the promoters of GTT2YLL058W, COQ6GND2 andYGR066C genes, induciblely to the MRS2 gene. HSF-binding consensus sites prediction indicated the promoter sequences of the stress-inducible genes contain heat shock elements (HSEs). These results suggest the genes are potential HSF-regulated targets.

 

Key words: Yeast, heat shock factor, heat shock elements, chromatin immunoprecipitation.