African Journal of
Biotechnology

  • Abbreviation: Afr. J. Biotechnol.
  • Language: English
  • ISSN: 1684-5315
  • DOI: 10.5897/AJB
  • Start Year: 2002
  • Published Articles: 12487

Full Length Research Paper

Development of species-specific primers for identifying Auricularia auricula-judae using intergenic spacer 1 (IGS1) sequences

Li Li, Wei Liu, Yin-Bing Bian and Yang Xiao*
Institute of Applied Mycology, Huazhong Agricultural University, Wuhan, Hubei 430070, P. R. China.
Email: [email protected]

  •  Accepted: 06 October 2011
  •  Published: 30 November 2011

Abstract

Auricularia auricula-judae, an important edible and medicinal mushroom was first cultivated in China more than one thousand years ago. In this study, we developed a simple and rapid polymerase chain reaction (PCR)-based diagnostic tool for identifying A. auricula-judae from other morphologically similar Auricularia species.Based on the sequence analysis of intergenic spacer 1 (IGS1) in genus Auricularia, two species-specific primer combinations were designed from IGS1 sequence of A. auricula-judae, both of them can generate DNA fragments of different size unique toA. auricula-judae. The validity of this two primer combinations were confirmed by correctly amplifying species-specific fragments from genomic DNA of another 32 A. auricula-judae strains. To our knowledge, this was the first study on development of species-specific primers via IGS1 sequence in jelly fungi and also the first application of IGS1 sequence in genus Auricularia.

 

Key words: AuriculariaAuricularia auricula-judae, intergenic spacer, species-specific primer.