June 2015
In silico approach to identification of a novel gene responsive to submergence stress in rice
Submergence is one of the major constraints to rice production. Bioinformatics approach has been widely used to identify candidate genes on many biological aspects. In the present study, a novel gene involved in submergence stress in rice, Os07g47670 was identified by in silico approach. The amino acid sequence of Os07g47670 is highly homologous to hypoxia-responsive family proteins. No disordered regions are found in...
June 2015
Construction of a full-length cDNA library and analysis of expressed sequence tags in white jute (Corchorus capsularis L.)
White jute (Corchorus capsularis L.) is recognized as an important industrial raw material fibre crop owing to its elite characters. However, little information is known about its molecular basis and genomics. In this study, a complementary DNA library of white jute was constructed and expressed sequence tags (ESTs) were characterized. The titers of original and amplified libraries were 2.32 × 107 and 1.07 ×...
June 2015
Toxicity assessment of modified Cry1Ac1 proteins and genetically modified insect-resistant Agb0101 rice
Insect-resistant Agb0101 rice was recently developed by modifying the cry1ac1 gene by changing codon usage changes relative to the native truncated cry1ac1 gene. To assess the toxicity of genetically modified Agb0101 rice, we conducted bioinfomational comparisons of the amino acid sequences that are not similar to known toxic proteins. Sufficient quantities of mCry1Ac1 protein were produced in Escherichia coli for in...
June 2015
Genetic variations between two ecotypes of Egyptian clover by inter-simple sequence repeat (ISSR) techniques
The inter-simple sequence repeat (ISSR) markers have been used in order to determine genetic variation and relationship between two clover ecotypes. Ten (10) primers for ISSR were used in this study but only six were successful in generating reproducible and reliable amplicons for different types of the Egyptian clover. The results reveal the polymorphism level by ISSR primers. HB10 ISSR-primer was higher than the rest...
June 2015
Incidence and antimicrobial susceptibility pattern of extended-spectrum-β-lactamase-producing Escherichia coli isolated from retail imported mackerel fish
During the past few years, extended-spectrum β-lactamase (ESBL)-producing Escherichia coli and other species of Enterobacteriaceae have become a matter of great concern in human and veterinary medicine. Several studies in recent years documented the prevalence and occurrence of ESBL-producing Enterobacteriaceae in food products such as meat, poultry and raw milk; therefore in this pilot study we examined imported...
June 2015
Screening of yeasts capable of producing cellulase-free xylanase
Xylanases have largely been obtained from filamentous fungi and bacteria; few studies have investigated the production of this enzyme by yeasts. The aim of this study was to isolate yeasts from different sources, such as vegetables, cereal grains, fruits, and agro-industrial waste and to obtain yeasts capable of producing celulase-free xylanase. Samples were enriched using yeast malt broth, and yeasts were isolated on...
June 2015
Recovery of active pathogenesis-related enzymes from the apoplast of Musa acuminata infected by Mycosphaerella fijiensis
The fungus Mycosphaerella fijiensis causes black Sigatoka (BS) disease, a major pathogen in the banana industry worldwide. Numerous molecular and biochemical studies have been done for the M. fijiensis, Musa acuminata interaction, but this is the first study describing the zymographic behavior of β-1,3-glucanase, chitinase and protease in the apoplast and symplast of healthy, BS-infected but asymptomatic and...
June 2015
Carotenoids from Phaffia rhodozyma: Antioxidant activity and stability of extracts
The main goal of this work was to establish the stability and antioxidant activity of the extracts obtained through different techniques for recovering carotenoids from Phaffia rhodozyma NRRL-Y 17268. The best conditions for extracting carotenoids through cell rupture with dimethylsulfoxide (DMSO) were found to be a particle size of 0.125 mm submitted to freezing temperature (-18°C) for 48 h (272 µg/g). For...
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