African Journal of
Microbiology Research

  • Abbreviation: Afr. J. Microbiol. Res.
  • Language: English
  • ISSN: 1996-0808
  • DOI: 10.5897/AJMR
  • Start Year: 2007
  • Published Articles: 5233

Full Length Research Paper

Molecular diagnosis of enterovirus infections in Chungnam Korea in 2010

SangGu Yeo1,2, JaeHak Park2, KwiSung Park3, DongUk Kim3, JaeKyung Kim4, KyungAh Yoon5, JaeHyoung Song1, JoonSoo Park6, YoungJin Choi7, KyoungAh Baek3* and JaeWan Soh8*
1Division of Vaccine Research, Center for Infectious Diseases, National Institute of Health, Centers for Disease Control and Prevention, Osong, Republic of Korea. 2Department of Laboratory Animal Medicine, College of Veterinary Medicine, Seoul National University, Seoul, Republic of Korea. 3Chungcheongnam-Do Institute of Health and Environment Research, Daejeon, Republic of Korea. 4Department of Laboratory Medicine, College of Medicine, Dankook University, Cheonan, Republic of Korea. 5Department of Clinical Pathology, Daejeon Health Sciences College, Daejeon, Republic of Korea. 6Departments of Pediatrics, College of Medicine, Soonchunhyang University, Cheonan, Republic of Korea. 7Departments of Laboratory Medicine, College of Medicine, Soonchunhyang University, Cheonan, Republic of Korea. 8Departments of Orthopedic Surgery, College of Medicine, Soonchunhyang University, Cheonan, Republic of Korea.
Email: [email protected], [email protected]

  •  Accepted: 16 July 2013
  •  Published: 02 August 2013

Abstract

The epidemiological data of enteroviruses isolated in Chungnam, Korea since 2005 has been reported, and this current study extends these observations in 2010. During this period, 178 of the total 920 samples (19.3%) were positive for enterovirus, and the types were identified using nucleotide sequence analysis in VP1. The temporal distribution was similar to previously reported data, however, coxsackievirus A6 and coxsackievirus B5 showed different patterns in detail.  Children aged < 1 year accounted for 89 (50%) of the total 178 isolates. Most coxsackievirus A6, coxsackievirus A9 and enterovirus 71 isolates were identified in children < 5, < 6 and < 4 years old, respectively. CVB5 was distributed evenly in children < 7 years old. Enterovirus serotypes were identified by sequence determination of the VP1 region, which resolved the isolated enteroviruses into 16 types in 2010; coxsackievirus A4, A5, A6, A9, A10, A12, A16, B2, B3, B4, B5, echovirus 17, 18, 25, 30 and enterovirus 71. The prevalent enterovirus types were coxsackievirus A6 (14.6%), B5 (15.7%), and enterovirus 71 (15.7%). This is the first time E17 has been identified in Korea since surveillance began in 1993. The presentations of enterovirus-infected patients were respiratory illness (30.3%), septicemia (19.7%), central nervous system infections (16.3%), gastrointestinal infections (11.2%), herpangina or hand-foot-mouth disease (10.7%), and genitourinary (5.6%). 

 

Key words: Enterovirus, reverse transcriptase-polymerase chain reaction (RT-PCR), epidemiology, molecular type.

Abbreviation

HEV, Human enteroviruses; HFMD, hand-foot-mouth disease; E,echovirus; CVA, coxsackievirus A; CVB, coxsackievirus B; EV-A71, enterovirus A71; RT-PCR, reverse transcription-polymerase chain reaction; NCR, non-coding region; CNS,central nervous system; CSF, cerebrospinal fluid; BLAST, basic alignment search tool.