Journal of
Plant Breeding and Crop Science

  • Abbreviation: J. Plant Breed. Crop Sci.
  • Language: English
  • ISSN: 2006-9758
  • DOI: 10.5897/JPBCS
  • Start Year: 2009
  • Published Articles: 447

Full Length Research Paper

Evaluation of coffee berry disease resistance (Colletotrichum kahawae) in F2 populations derived from Arabica coffee varieties Rume Sudan and SL 28

James M. Gimase
  • James M. Gimase
  • Coffee Research Institute, Kenya Agricultural and Livestock Research Organization (KALRO), P. O. Box 4-00232, Ruiru, Kenya.
  • Google Scholar
Wilson M. Thagana
  • Wilson M. Thagana
  • Department of Agricultural Science and Technology, Kenyatta University, P. O. Box 43844 – 00100, Nairobi, Kenya.
  • Google Scholar
Chripine O. Omondi
  • Chripine O. Omondi
  • Industrial Crops Research Institute, Kenya Agricultural and Livestock Research Organization (KALRO), P. O. Box 16 – 80109, Mtwapa, Kenya.
  • Google Scholar
John M. Ithiru
  • John M. Ithiru
  • Coffee Research Institute, Kenya Agricultural and Livestock Research Organization (KALRO), P. O. Box 4-00232, Ruiru, Kenya.
  • Google Scholar


  •  Received: 13 June 2019
  •  Accepted: 23 September 2019
  •  Published: 30 November 2019

References

Agwanda CO, Lashermes P, Trouslot P, Combes MC, Charrier A (1997). Identification of RAPD markers for resistance to coffee berry disease, Colletotrichum kahawae, in arabica coffee. Euphytica 97:241-248.
Crossref

 

Alkimim ER, Caixeta ET, Sousa TV, Pereira AV, Oliveira ACB, Zambolim L, Sakiyama NS (2017). Marker-assisted selection provides Arabica coffee with genes from other Coffea species targeting on multiple resistance to rust and coffee berry disease. MoleculaR Breeding 37(6):1-10.
Crossref

 

Arunakumari K, Durgarani CV, Satturu V, Sarikonda KR, Chittoor PDR, Vutukuri B, Laha GS, Nelli APK, Gattu S, Jamal M, Prasadbabu A, Hajira S, Sundaram RM (2016). Marker-Assisted Pyramiding of Genes Conferring Resistance against Bacterial Blight and Blast Diseases into Indian Rice Variety MTU1010. ScienceDirect Rice Science 23(6):306-316.
Crossref

 

Baison J (2014). Mapping and identification of disease resistance candidate genes in three Malus populations using SSRs, DArT and Infinium SNP markers and Illumina sequencing technology (PhD thesis), University of the Western Cape, South Africa. p. 343.

 

Bertrand B, Guyot B, Anthony F, Lashermes P (2003). Impact of Coffea canephora gene introgression on beverage quality of C. arabica. Theoretical and Applied Genetics 107(3):387-394.
Crossref

 

Brito GG, Caixeta ET, Gallina AP, Zambolim EM, Zambolim L, Diola V, Loureiro ME (2010). Inheritance of coffee leaf rust resistance and identification of AFLP markers linked to the resistance gene. Euphytica 173:255-264.
Crossref

 

Coffee Research Institute (2016). Coffee Production Recommendation, 4th Ed. p 107.

 

Diola V, Brito GG, Caixeta ET, Zambolim EM, Sakiyama NS, Loureiro ME (2011). High-density genetic mapping for coffee leaf rust resistance. Tree Genetics and Genomes 7(6): 1199-1208.
Crossref

 

Diola V, Brito GG, Caixeta ET, Pereira LFP, Loureiro ME (2013). A new set of differentially expressed signaling genes is early expressed in coffee leaf rust race II incompatible interaction. Functional and Integrative Genomics 13(3):379-389.
Crossref

 

Fazel-Najafabadi M, Peng J, Peairs FB, Simkova H, Kilian A, Lapitan NLV (2015). Genetic mapping of resistance to Diuraphis noxia (Kurdjumov) biotype 2 in wheat (Triticum aestivum L.) accession CI240. Euphytica 203:607-614.
Crossref

 

Gichimu BM, Gichuru EK, Mamati GE, Nyende AB (2014). Occurrence of Ck-1 gene conferring resistance to Coffee Berry Disease in Coffea arabica cv. Ruiru 11 and its parental genotypes. Journal of Agricultural and Crop Research 2(3): 51-61.
Crossref

 

Gichuru EK. (2007). Characterization of genetic resistance of Coffee berry disease (Colletotrichum kahawae, Waller and Bridge) in Arabica coffee (Coffea arabica L.) that is introgressed from Coffea canephora (PhD thesis), University of Nairobi, Kenya. P. 224.

 

Gichuru EK, Agwanda CO, Combes MC, Mutitu EW, Ngugi ECK, Bertrand B, Lasherme, P (2008). Identification of molecular markers linked to a gene conferring resistance to Coffee berry disease (Colletotrichum kahawae) in Coffea arabica. Plant Pathology 57:1117-1124.
Crossref

 

Gimase JM (2014). Genetic Diversity of Arabusta coffee and their parental genotypes (MSc thesis), Kenyatta University, Kenya. p 171.

 

Hindorf H, Omondi CO, (2011) A review of three major fungal diseases of Coffea arabica L. in the rainforests of Ethiopia and progress in breeding for resistance in Kenya. Journal of Advance Research 2(2):109-120.
Crossref

 

Jaetzold R, Schimidt H, Hornez H, Shisanya C (2006). Farm Management Handbook of Kenya, Vol. II/C: Natural Conditions and Farm Management Information, Central Kenya. Ministry of Agriculture, Nairobi; Kenya. p.573.

 

Kathurima CW (2013). Characterization of the Diversity of Coffee Genotypes in Kenya by Genetic, Biochemical and Beverage Quality Profile, (PhD thesis) Jomo Kenyatta University of Agriculture and Technology, Kenya. P. 240.

 

Kenya National Bureau of Statistics (2019). Economic survey Report. 

View

 

Kim SM, Reinke RF (2019). A novel resistance gene for bacterial blight in rice, Xa43(t) identified by GWAS, confirmed by QTL mapping using a bi-parental population. PLoS ONE 14(2):e0211775.
Crossref

 

McDonald J (1926). A preliminary account of a disease of green berries in Kenya colony. Transactions of the British mycological Society 11(1-2):145-154.
Crossref

 

Mekonnen T, Haileselassie T, Tesfaye K (2017). Identification, Mapping and Pyramiding of Genes/Quantitative Trait Loci (QTLs) for Durable Resistance of Crops to Biotic Stresses. Journal of Plant Pathology and Microbiology 8:412.

 

Minai JM, Nyairo N, Mbataru P (2014). Analysis of socio-economic factors affecting the coffee yields of smallholder farmers in Kirinyaga County, Kenya. Journal of Agricultural and Crop Research 2(12):228-235.

 

Moncada MP, Tovar E, Montoya JC, González A, Spindel J, McCouch S (2016). A genetic linkage map of coffee (Coffea arabica L.) and QTL for yield, plant height, and bean size. Tree Genetics and Genomes 12:5.
Crossref

 

Mtenga JD (2016). Diversity, combining ability and Coffee Berry Disease (colletotrichum kahawae) resistance among Ethiopian and Tanzanian Arabica coffee genotypes, (PhD thesis), Sokoine University of Agriculture, Tanzania. p 117

 

Omondi CO, Ayiecho PO, Mwang'ombe AW, Hindorf H (2001). Resistance of Coffea arabica cv. Ruiru 11 tested with different isolates of Colletotrichum kahawae, the causal agent of coffee berry disease. Euphytica 121:19-24.
Crossref

 

Omondi CO, Gichimu BM, Cheserek J, Gimase J (2016). Leveraging germplasm acquisition for Arabica Coffee improvement in Kenya. Journal of Agriculture and Crop Research 4(1):9-16.

 

Pestana KN, Capucho AS, Caixeta ET, de Almeida DP, Zambolim EM, Cruz CD, Zambolim L, Pereira AA, Oliveira ACB, Sakiyama NS (2015). Inheritance study and linkage mapping of resistance loci to

 

Hemileia vastatrix in Híbrido de Timor UFV 443-03. Tree Genetics and Genomes 11:72.

 

Schneider K (2005). Genetic and Physical Mapping; The Handbook of Plant Genome Mapping; WILEY-VCH Verlag GmbH and Co., KGaA, Weinheim, p 22.

 

Sundaram RM, Vishnupriya MR, Laha GS, Rani NS, Srinivasa RP, Balachandran SM, Reddy GA, Sharma NP, Sonti RV (2009). Introduction of bacterial blight resistance into Triguna, a high yielding, mid-early duration rice variety by molecular marker assisted breeding. Biotechnology Journal 4(3):400-407.
Crossref

 

Van der Vossen HAM, Cook RTA, Murakaru GNW (1976). Breeding for resistance to Coffee Berry Disease caused by Colletotrichum coffeanum Noack sensu Hindorf in Coffea arabica L. I. Methods of pre-selection for resistance. Euphytica 25:733-756.
Crossref

 

Van der Vossen, HAM, Walyaro DJA (1980). Breeding for resistance to coffee berry disease in coffea arabica L. II. Inheritance of the resistance. Euphytica 29:777-791.
Crossref

 

Van der Vossen, HAM, Walyaro DJA (1981). Coffee breeding programme in Kenya. A review of progress made since 1971 and a plan of action for the coming years. Kenya Coffee 46:113-130

 

Van Der Vossen H, Walyaro D (2009). Additional evidence for oligogenic inheritance of durable host resistance to coffee berry disease (Colletotrichum kahawae) in Arabica coffee (Coffea arabica L.). Euphytica 165(1): 105-111.
Crossref

 

Van der Vossen H, Bertrand B, Charrier A (2015). Next generation variety development for sustainable production of arabica coffee (Coffea arabica L.): a review. Euphytica 204:243.
Crossref

 

Vieira A, Diniz I, Loureiro A, Pereira AP, Silva MC, Varzea V, Batista D (2019). Aggressiveness profiling of the coffee pathogen Colletotrichum kahawae. Plant Pathology 68:358-368.
Crossref

 

Zhao GZ, Jiang CM, Liu JX, Chen YM, Yu TQ, Cheng ZQ (2014). Identification and analysis on the rice blast resistance gene Pi-ta in wild rice from Yunnan, China. China Journal of Rice Science 28(6):675-680.

 

Zhou L, Vega FE, Tan H, Lluch RA., Meinhard LW, Fang W, Mischke S, Irish B, Zhang D (2016). Developing Single Nucleotide Polymorphism (SNP) Markers for the Identification of Coffee Germplasm. Tropical Plant Biology 9:82-95.
Crossref